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Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 171.0)
Gene families : OG0000390 (Archaeplastida) Phylogenetic Tree(s): OG0000390_tree ,
OG_05_0000129 (LandPlants) Phylogenetic Tree(s): OG_05_0000129_tree ,
OG_06_0000040 (SeedPlants) Phylogenetic Tree(s): OG_06_0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_25861 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_02142 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.03 | Archaeplastida | |
| Gb_04911 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.21 | Archaeplastida | |
| Gb_04925 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Gb_07934 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida | |
| Gb_16945 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.19 | Archaeplastida | |
| Gb_17559 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
| Gb_18114 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.18 | Archaeplastida | |
| Gb_18380 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.32 | Archaeplastida | |
| Gb_18456 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.09 | Archaeplastida | |
| Gb_19756 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.13 | Archaeplastida | |
| Gb_20537 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.16 | Archaeplastida | |
| Gb_21087 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Gb_28461 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | Archaeplastida | |
| Gb_30626 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | Archaeplastida | |
| Gb_31534 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.03 | Archaeplastida | |
| Gb_36049 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.1 | Archaeplastida | |
| Gb_36670 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.16 | Archaeplastida | |
| Gb_38275 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
| Gb_39693 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.22 | Archaeplastida | |
| Pp3c25_5410V3.1 | No alias | No annotation | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0015074 | DNA integration | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 183 | 281 |
| No external refs found! |