Gb_25882

Description : Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica (sp|q10b98|c3h25_orysj : 288.0)

Gene families : OG0006543 (Archaeplastida) Phylogenetic Tree(s): OG0006543_tree ,
OG_05_0008169 (LandPlants) Phylogenetic Tree(s): OG_05_0008169_tree ,
OG_06_0009845 (SeedPlants) Phylogenetic Tree(s): OG_06_0009845_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_25882
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01024759001	No alias	Zinc finger CCCH domain-containing protein 25 OS=Oryza...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
BP	GO:0016556	mRNA modification	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
BP	GO:0080009	mRNA methylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	135	155
IPR000504	RRM_dom	38	108

External Links

No external refs found!