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  5. Gb_25943

Gb_25943


Description : Rhodanese-like domain-containing protein 8, chloroplastic OS=Arabidopsis thaliana (sp|f4i933|str8_arath : 312.0)


Gene families : OG0005958 (Archaeplastida) Phylogenetic Tree(s): OG0005958_tree ,
OG_05_0007726 (LandPlants) Phylogenetic Tree(s): OG_05_0007726_tree ,
OG_06_0008609 (SeedPlants) Phylogenetic Tree(s): OG_06_0008609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25943
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT1G17850 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.03 Archaeplastida
LOC_Os03g64350.1 No alias Rhodanese-like domain-containing protein 8,... 0.03 Archaeplastida
Mp3g19900.1 No alias Rhodanese-like domain-containing protein 8,... 0.02 Archaeplastida
Pp3c17_19320V3.1 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.03 Archaeplastida
Zm00001e006452_P001 No alias Rhodanese-like domain-containing protein 8,... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016851 magnesium chelatase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Neighborhood
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022111 Rhodanese_C 143 237
IPR001763 Rhodanese-like_dom 38 133
No external refs found!