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  5. Gb_26000

Gb_26000


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 298.0)


Gene families : OG0000390 (Archaeplastida) Phylogenetic Tree(s): OG0000390_tree ,
OG_05_0000129 (LandPlants) Phylogenetic Tree(s): OG_05_0000129_tree ,
OG_06_0000040 (SeedPlants) Phylogenetic Tree(s): OG_06_0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26000
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Gb_01443 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_02142 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Gb_02770 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_04256 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_04812 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.21 Archaeplastida
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 Archaeplastida
Gb_05692 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.16 Archaeplastida
Gb_08180 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.42 Archaeplastida
Gb_08424 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.2 Archaeplastida
Gb_08526 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.3 Archaeplastida
Gb_16634 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.15 Archaeplastida
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.14 Archaeplastida
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_19756 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.14 Archaeplastida
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_21218 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_23888 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.25 Archaeplastida
Gb_24315 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_26530 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.29 Archaeplastida
Gb_29642 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 Archaeplastida
Gb_30626 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_31767 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 Archaeplastida
Gb_32814 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_32952 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 Archaeplastida
Gb_34479 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.32 Archaeplastida
Gb_34728 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_34971 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.28 Archaeplastida
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.13 Archaeplastida
Gb_36638 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_36670 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Gb_36823 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.28 Archaeplastida
Gb_38275 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_39849 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.21 Archaeplastida
Gb_40169 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.12 Archaeplastida
Gb_40931 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.31 Archaeplastida
Gb_41260 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!