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  5. Gb_26035

Gb_26035


Description : no hits & (original description: none)


Gene families : OG0001532 (Archaeplastida) Phylogenetic Tree(s): OG0001532_tree ,
OG_05_0001608 (LandPlants) Phylogenetic Tree(s): OG_05_0001608_tree ,
OG_06_0002127 (SeedPlants) Phylogenetic Tree(s): OG_06_0002127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26035
Cluster HCCA: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00218150 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00016p00205550 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Cre11.g481900 No alias No description available 0.04 Archaeplastida
GSVIVT01033039001 No alias No description available 0.04 Archaeplastida
LOC_Os04g54420.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g03570.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g03340.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10437244g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_12916g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_766870g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp6g09520.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c6_12550V3.1 No alias ENTH/VHS family protein 0.01 Archaeplastida
Smo440209 No alias No description available 0.02 Archaeplastida
Solyc02g094360.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g054410.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g012740.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e006808_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e018790_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024045_P003 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005049 nuclear export signal receptor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006903 RNA_pol_II-bd 57 118
No external refs found!