Gb_26159

Description : Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana (sp|q9ltv8|pp224_arath : 541.0)

Gene families : OG0003060 (Archaeplastida) Phylogenetic Tree(s): OG0003060_tree ,
OG_05_0001276 (LandPlants) Phylogenetic Tree(s): OG_05_0001276_tree ,
OG_06_0000902 (SeedPlants) Phylogenetic Tree(s): OG_06_0000902_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_26159
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_408185g0010	No alias	Pentatricopeptide repeat-containing protein At2g33760...	0.06	Archaeplastida
MA_956160g0010	No alias	Pentatricopeptide repeat-containing protein At3g02330,...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	634	688
IPR002885	Pentatricopeptide_repeat	536	558
IPR002885	Pentatricopeptide_repeat	233	258
IPR002885	Pentatricopeptide_repeat	261	287
IPR002885	Pentatricopeptide_repeat	460	508
IPR002885	Pentatricopeptide_repeat	360	404
IPR002885	Pentatricopeptide_repeat	157	205

External Links

No external refs found!