Gb_26365

Description : component mtRPL7/L12 of large ribosomal subunit proteome

Gene families : OG0000950 (Archaeplastida) Phylogenetic Tree(s): OG0000950_tree ,
OG_05_0000673 (LandPlants) Phylogenetic Tree(s): OG_05_0000673_tree ,
OG_06_0000509 (SeedPlants) Phylogenetic Tree(s): OG_06_0000509_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_26365
Cluster	HCCA: Cluster_184

Target	Alias	Description	ECC score	Gene Family Method
AT1G70190	No alias	Ribosomal protein L7/L12, oligomerisation;Ribosomal...	0.05	Archaeplastida
AT3G06040	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.03	Archaeplastida
AT4G36420	No alias	Ribosomal protein L12 family protein	0.05	Archaeplastida
AT4G37660	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.1	Archaeplastida
Cpa\|evm.model.tig00020704.55	No alias	50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea	0.02	Archaeplastida
LOC_Os02g10540.1	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.06	Archaeplastida
MA_137800g0010	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.09	Archaeplastida
Pp3c19_21200V3.1	No alias	Ribosomal protein L7/L12, oligomerisation;Ribosomal...	0.04	Archaeplastida
Pp3c3_26860V3.1	No alias	Ribosomal protein L12 family protein	0.02	Archaeplastida
Solyc02g031970.1.1	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.04	Archaeplastida
Solyc02g092300.1.1	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.06	Archaeplastida
Solyc09g010030.3.1	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	Archaeplastida
Zm00001e014041_P002	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e025012_P001	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
CC	GO:0005741	mitochondrial outer membrane	IEP	Neighborhood
MF	GO:0008097	5S rRNA binding	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0031968	organelle outer membrane	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013823	Ribosomal_L7/L12_C	175	240
IPR008932	Ribosomal_L7/L12_oligo	109	147

External Links

No external refs found!

Gb_26365

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation