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  5. AT2G40060

AT2G40060


Description : Clathrin light chain protein


Gene families : OG0002368 (Archaeplastida) Phylogenetic Tree(s): OG0002368_tree ,
OG_05_0002034 (LandPlants) Phylogenetic Tree(s): OG_05_0002034_tree ,
OG_06_0002134 (SeedPlants) Phylogenetic Tree(s): OG_06_0002134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40060
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Gb_14357 No alias light chain of clathrin triskelion 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009504 cell plate IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000781 chromosome, telomeric region IEP Neighborhood
BP GO:0002237 response to molecule of bacterial origin IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003958 NADPH-hemoprotein reductase activity IEP Neighborhood
MF GO:0004352 glutamate dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0004353 glutamate dehydrogenase [NAD(P)+] activity IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP Neighborhood
MF GO:0004864 protein phosphatase inhibitor activity IEP Neighborhood
MF GO:0005047 signal recognition particle binding IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005457 GDP-fucose transmembrane transporter activity IEP Neighborhood
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP Neighborhood
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006491 N-glycan processing IEP Neighborhood
BP GO:0006493 protein O-linked glycosylation IEP Neighborhood
BP GO:0006517 protein deglycosylation IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
MF GO:0009824 AMP dimethylallyltransferase activity IEP Neighborhood
BP GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
CC GO:0009897 external side of plasma membrane IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
BP GO:0010286 heat acclimation IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0010959 regulation of metal ion transport IEP Neighborhood
MF GO:0015105 arsenite transmembrane transporter activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015700 arsenite transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015783 GDP-fucose transmembrane transport IEP Neighborhood
BP GO:0015786 UDP-glucose transmembrane transport IEP Neighborhood
MF GO:0016208 AMP binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019212 phosphatase inhibitor activity IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0030544 Hsp70 protein binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0033609 oxalate metabolic process IEP Neighborhood
BP GO:0033611 oxalate catabolic process IEP Neighborhood
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Neighborhood
MF GO:0036080 purine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
BP GO:0042891 antibiotic transport IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043270 positive regulation of ion transport IEP Neighborhood
MF GO:0043295 glutathione binding IEP Neighborhood
BP GO:0043434 response to peptide hormone IEP Neighborhood
BP GO:0043649 dicarboxylic acid catabolic process IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0046482 para-aminobenzoic acid metabolic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
BP GO:0048358 mucilage pectin biosynthetic process IEP Neighborhood
BP GO:0048363 mucilage pectin metabolic process IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
MF GO:0050203 oxalate-CoA ligase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051050 positive regulation of transport IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0051924 regulation of calcium ion transport IEP Neighborhood
BP GO:0051928 positive regulation of calcium ion transport IEP Neighborhood
MF GO:0052622 ATP dimethylallyltransferase activity IEP Neighborhood
MF GO:0052623 ADP dimethylallyltransferase activity IEP Neighborhood
MF GO:0052742 phosphatidylinositol kinase activity IEP Neighborhood
BP GO:0060416 response to growth hormone IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071216 cellular response to biotic stimulus IEP Neighborhood
BP GO:0071219 cellular response to molecule of bacterial origin IEP Neighborhood
BP GO:0071323 cellular response to chitin IEP Neighborhood
BP GO:0071417 cellular response to organonitrogen compound IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072334 UDP-galactose transmembrane transport IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
BP GO:0080148 negative regulation of response to water deprivation IEP Neighborhood
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0080170 hydrogen peroxide transmembrane transport IEP Neighborhood
BP GO:0090480 purine nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
MF GO:1900750 oligopeptide binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901652 response to peptide IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:2000070 regulation of response to water deprivation IEP Neighborhood
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 53 224
No external refs found!