Gb_26755

Description : pectate lyase

Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_26755
Cluster	HCCA: Cluster_310

Target	Alias	Description	ECC score	Gene Family Method
AT3G24670	No alias	Pectin lyase-like superfamily protein	0.02	Archaeplastida
GSVIVT01003984001	No alias	Cell wall.pectin.modification and degradation.pectate lyase	0.03	Archaeplastida
GSVIVT01011348001	No alias	Cell wall.pectin.modification and degradation.pectate lyase	0.02	Archaeplastida
GSVIVT01028548001	No alias	Cell wall.pectin.modification and degradation.pectate lyase	0.02	Archaeplastida
LOC_Os04g05050.1	No alias	pectate lyase	0.06	Archaeplastida
LOC_Os10g31910.1	No alias	pectate lyase	0.03	Archaeplastida
MA_10429028g0020	No alias	pectate lyase	0.04	Archaeplastida
Solyc01g010740.4.1	No alias	pectate lyase	0.03	Archaeplastida
Solyc02g067450.4.1	No alias	pectate lyase	0.02	Archaeplastida
Solyc03g113150.3.1	No alias	pectate lyase	0.04	Archaeplastida
Solyc06g083580.4.1	No alias	pectate lyase	0.05	Archaeplastida
Zm00001e008755_P002	No alias	pectate lyase	0.04	Archaeplastida
Zm00001e040624_P001	No alias	pectate lyase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0015267	channel activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002022	Pec_lyase	166	350

External Links

No external refs found!