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  5. Gb_26813

Gb_26813


Description : CASP-like protein 1U1 OS=Picea sitchensis (sp|a9p0a6|cspl5_picsi : 140.0)


Gene families : OG0000389 (Archaeplastida) Phylogenetic Tree(s): OG0000389_tree ,
OG_05_0000192 (LandPlants) Phylogenetic Tree(s): OG_05_0000192_tree ,
OG_06_0000438 (SeedPlants) Phylogenetic Tree(s): OG_06_0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26813
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00176090 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.05 Archaeplastida
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.04 Archaeplastida
AT1G03700 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT3G06390 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT4G03540 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT4G15610 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT4G15620 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
AT4G20390 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
GSVIVT01008618001 No alias CASP-like protein 1F1 OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01020544001 No alias CASP-like protein 1C2 OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01036085001 No alias Casparian strip membrane protein 2 OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01037957001 No alias CASP-like protein 1B2 OS=Vitis vinifera 0.03 Archaeplastida
Gb_12158 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_12159 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
Gb_40903 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g13560.1 No alias CASP-like protein 1C1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os02g36845.1 No alias Casparian strip membrane protein 7 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os07g26110.1 No alias CASP-like protein 1D1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os12g41690.1 No alias CASP-like protein 1B1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10429324g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
MA_10431939g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
MA_652592g0010 No alias No annotation 0.01 Archaeplastida
MA_67384g0020 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.03 Archaeplastida
Pp3c12_23940V3.1 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
Pp3c14_2270V3.1 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
Solyc01g067330.3.1 No alias CASP-like protein 1E1 OS=Glycine max... 0.04 Archaeplastida
Solyc02g069730.3.1 No alias CASP-like protein 1B1 OS=Ricinus communis... 0.02 Archaeplastida
Solyc03g097720.4.1 No alias CASP-like protein 1F1 OS=Vitis vinifera... 0.03 Archaeplastida
Solyc03g097730.2.1 No alias CASP-like protein 1F1 OS=Ricinus communis... 0.05 Archaeplastida
Solyc04g005620.3.1 No alias Casparian strip membrane protein 2 OS=Solanum demissum... 0.05 Archaeplastida
Solyc06g074230.3.1 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.04 Archaeplastida
Solyc09g010200.4.1 No alias Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.04 Archaeplastida
Solyc10g083250.2.1 No alias Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.05 Archaeplastida
Zm00001e006491_P001 No alias Casparian strip membrane protein 2 OS=Zea mays... 0.05 Archaeplastida
Zm00001e015806_P001 No alias Casparian strip membrane protein 3 OS=Sorghum bicolor... 0.03 Archaeplastida
Zm00001e017631_P001 No alias CASP-like protein 1E1 OS=Zea mays (sp|b4fap1|cspl4_maize : 254.0) 0.02 Archaeplastida
Zm00001e024279_P001 No alias Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0008521 acetyl-CoA transmembrane transporter activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015215 nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051184 cofactor transmembrane transporter activity IEP Neighborhood
MF GO:0051185 coenzyme transmembrane transporter activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
MF GO:0071077 adenosine 3',5'-bisphosphate transmembrane transporter activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 7 153
No external refs found!