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  5. Gb_26814

Gb_26814


Description : CASP-like protein 1U1 OS=Picea sitchensis (sp|a9p0a6|cspl5_picsi : 114.0)


Gene families : OG0000389 (Archaeplastida) Phylogenetic Tree(s): OG0000389_tree ,
OG_05_0000192 (LandPlants) Phylogenetic Tree(s): OG_05_0000192_tree ,
OG_06_0000438 (SeedPlants) Phylogenetic Tree(s): OG_06_0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26814
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00176090 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.02 Archaeplastida
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.02 Archaeplastida
AT1G14160 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT2G36100 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT4G15610 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT4G15620 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
LOC_Os01g13560.1 No alias CASP-like protein 1C1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os02g36845.1 No alias Casparian strip membrane protein 7 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os04g58760.1 No alias Casparian strip membrane protein 1 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os06g12500.1 No alias Casparian strip membrane protein 3 OS=Oryza sativa... 0.02 Archaeplastida
MA_10429324g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.03 Archaeplastida
Pp3c14_2270V3.1 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
Solyc03g097720.4.1 No alias CASP-like protein 1F1 OS=Vitis vinifera... 0.04 Archaeplastida
Zm00001e009346_P001 No alias CASP-like protein 1D1 OS=Zea mays (sp|b6u361|cspl3_maize : 309.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 15 162
No external refs found!