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  5. Gb_26834

Gb_26834


Description : regulatory subunit of geranyl diphosphate synthase complex. isoprenyl diphosphate synthase


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0009623 (LandPlants) Phylogenetic Tree(s): OG_05_0009623_tree ,
OG_06_0006381 (SeedPlants) Phylogenetic Tree(s): OG_06_0006381_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26834
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
AT4G36810 GGPS1 geranylgeranyl pyrophosphate synthase 1 0.05 Archaeplastida
Zm00001e015381_P001 No alias regulatory subunit of geranyl diphosphate synthase... 0.04 Archaeplastida
Zm00001e023206_P001 No alias regulatory subunit of geranyl diphosphate synthase... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005542 folic acid binding IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 88 314
No external refs found!