Gb_26865


Description : E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana (sp|q9spl2|cip8_arath : 133.0)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0001225 (SeedPlants) Phylogenetic Tree(s): OG_06_0001225_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26865
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AT5G01980 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01037379001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
LOC_Os05g01940.1 No alias elicitor peptide precursor (proPEP) 0.02 Archaeplastida
MA_55505g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g04520.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g050040.4.1 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc02g065650.1.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 Archaeplastida
Zm00001e001202_P001 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e024455_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038199_P001 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 383 424
No external refs found!