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Description : Pectin lyase-like superfamily protein
Gene families : OG0009777 (Archaeplastida) Phylogenetic Tree(s): OG0009777_tree ,
OG_05_0010197 (LandPlants) Phylogenetic Tree(s): OG_05_0010197_tree ,
OG_06_0009129 (SeedPlants) Phylogenetic Tree(s): OG_06_0009129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G40310 | |
| Cluster | HCCA: Cluster_266 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G43080 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
| AT1G43090 | No alias | Pectin lyase-like superfamily protein | 0.09 | Archaeplastida | |
| AT1G43100 | No alias | Pectin lyase-like superfamily protein | 0.07 | Archaeplastida | |
| AT2G15460 | No alias | Pectin lyase-like superfamily protein | 0.08 | Archaeplastida | |
| AT2G15470 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
| AT4G13760 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | ISS | Interproscan |
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| BP | GO:0005975 | carbohydrate metabolic process | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004871 | obsolete signal transducer activity | IEP | Neighborhood |
| MF | GO:0005351 | carbohydrate:proton symporter activity | IEP | Neighborhood |
| MF | GO:0005402 | carbohydrate:cation symporter activity | IEP | Neighborhood |
| BP | GO:0007267 | cell-cell signaling | IEP | Neighborhood |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0008506 | sucrose:proton symporter activity | IEP | Neighborhood |
| MF | GO:0008515 | sucrose transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0009669 | sucrose:cation symporter activity | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015154 | disaccharide transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015157 | oligosaccharide transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015293 | symporter activity | IEP | Neighborhood |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Neighborhood |
| MF | GO:0015295 | solute:proton symporter activity | IEP | Neighborhood |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0023052 | signaling | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000743 | Glyco_hydro_28 | 63 | 391 |
| No external refs found! |