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  5. Gb_27100

Gb_27100


Description : Qa-SNARE component KNOLLE of SNARE cell-plate vesicle fusion complex. SYP1-group Qa-type SNARE component


Gene families : OG0000372 (Archaeplastida) Phylogenetic Tree(s): OG0000372_tree ,
OG_05_0000804 (LandPlants) Phylogenetic Tree(s): OG_05_0000804_tree ,
OG_06_0000894 (SeedPlants) Phylogenetic Tree(s): OG_06_0000894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27100
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AT3G11820 SYP121,... syntaxin of plants 121 0.02 Archaeplastida
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.02 Archaeplastida
LOC_Os03g57310.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
LOC_Os06g07200.1 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
Solyc10g081850.3.1 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
Zm00001e018305_P001 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 40 245
IPR000727 T_SNARE_dom 246 298
No external refs found!