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  5. Gb_27233

Gb_27233


Description : no hits & (original description: none)


Gene families : OG0000364 (Archaeplastida) Phylogenetic Tree(s): OG0000364_tree ,
OG_05_0000134 (LandPlants) Phylogenetic Tree(s): OG_05_0000134_tree ,
OG_06_0000108 (SeedPlants) Phylogenetic Tree(s): OG_06_0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27233
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Gb_00288 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_01729 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.12 Archaeplastida
Gb_03442 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_05523 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_06034 No alias no hits & (original description: none) 0.14 Archaeplastida
Gb_06223 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_06978 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Gb_08105 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_08666 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_09514 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.18 Archaeplastida
Gb_10464 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_10876 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Gb_13320 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_13443 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_15074 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_15820 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_18335 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 Archaeplastida
Gb_20056 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_21118 No alias no hits & (original description: none) 0.12 Archaeplastida
Gb_21518 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Gb_22414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.25 Archaeplastida
Gb_24597 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_25092 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_25323 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_26269 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.21 Archaeplastida
Gb_26666 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_26878 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_26975 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_27666 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_28622 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.3 Archaeplastida
Gb_29546 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_30261 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_30317 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_33182 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_34085 No alias no hits & (original description: none) 0.11 Archaeplastida
Gb_36579 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_37666 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_38048 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Gb_40384 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_40566 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.21 Archaeplastida
Gb_41335 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Pp3c15_18420V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 59 93
No external refs found!