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Gb_27277


Description : RSZ32/33 RNA splicing factor


Gene families : OG0002802 (Archaeplastida) Phylogenetic Tree(s): OG0002802_tree ,
OG_05_0002795 (LandPlants) Phylogenetic Tree(s): OG_05_0002795_tree ,
OG_06_0003143 (SeedPlants) Phylogenetic Tree(s): OG_06_0003143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27277
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01025580001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.04 Archaeplastida
Gb_30496 No alias RSZ32/33 RNA splicing factor 0.05 Archaeplastida
LOC_Os05g02880.1 No alias RSZ32/33 RNA splicing factor 0.03 Archaeplastida
Zm00001e027602_P005 No alias RSZ32/33 RNA splicing factor 0.05 Archaeplastida
Zm00001e027603_P003 No alias RSZ32/33 RNA splicing factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 31 71
IPR001878 Znf_CCHC 100 115
IPR001878 Znf_CCHC 121 137
No external refs found!