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  5. Gb_27282

Gb_27282


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 555.0)


Gene families : OG0016348 (Archaeplastida) Phylogenetic Tree(s): OG0016348_tree ,
OG_05_0018260 (LandPlants) Phylogenetic Tree(s): OG_05_0018260_tree ,
OG_06_0027110 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27282
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
MA_102181g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
MA_140553g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
Solyc12g011400.3.1 No alias Pentatricopeptide repeat-containing protein At1g53600,... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 770 827
IPR002885 Pentatricopeptide_repeat 496 543
IPR002885 Pentatricopeptide_repeat 596 644
IPR002885 Pentatricopeptide_repeat 108 140
IPR002885 Pentatricopeptide_repeat 232 279
IPR002885 Pentatricopeptide_repeat 409 435
IPR002885 Pentatricopeptide_repeat 141 171
IPR002885 Pentatricopeptide_repeat 307 333
IPR002885 Pentatricopeptide_repeat 335 361
IPR002885 Pentatricopeptide_repeat 571 593
IPR002885 Pentatricopeptide_repeat 672 695
IPR002885 Pentatricopeptide_repeat 438 466
IPR002885 Pentatricopeptide_repeat 200 229
No external refs found!