Gb_27360


Description : scaffold component CUL3 of CUL3-BTB E3 ligase complexes


Gene families : OG0001033 (Archaeplastida) Phylogenetic Tree(s): OG0001033_tree ,
OG_05_0002897 (LandPlants) Phylogenetic Tree(s): OG_05_0002897_tree ,
OG_06_0002759 (SeedPlants) Phylogenetic Tree(s): OG_06_0002759_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27360
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00163840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Cre07.g324050 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os02g51180.1 No alias scaffold component CUL3 of CUL3-BTB E3 ligase complexes 0.04 Archaeplastida
Mp4g12190.1 No alias scaffold component CUL3 of CUL3-BTB E3 ligase complexes 0.03 Archaeplastida
Pp3c11_21000V3.1 No alias cullin 3 0.02 Archaeplastida
Pp3c12_14490V3.1 No alias cullin4 0.04 Archaeplastida
Pp3c3_20200V3.1 No alias cullin4 0.05 Archaeplastida
Pp3c7_5730V3.1 No alias cullin 3 0.04 Archaeplastida
Smo98006 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc01g010820.3.1 No alias scaffold component CUL3 of CUL3-BTB E3 ligase complexes 0.03 Archaeplastida
Zm00001e005919_P001 No alias scaffold component CUL4 of CUL4-DDB1 ubiquitination... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019211 phosphatase activator activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001373 Cullin_N 156 760
IPR019559 Cullin_neddylation_domain 792 853
No external refs found!