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  5. Gb_27469

Gb_27469


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 551.0)


Gene families : OG0013345 (Archaeplastida) Phylogenetic Tree(s): OG0013345_tree ,
OG_05_0015875 (LandPlants) Phylogenetic Tree(s): OG_05_0015875_tree ,
OG_06_0014228 (SeedPlants) Phylogenetic Tree(s): OG_06_0014228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27469
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
MA_465411g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 378 403
IPR002885 Pentatricopeptide_repeat 510 533
IPR002885 Pentatricopeptide_repeat 215 241
IPR002885 Pentatricopeptide_repeat 773 797
IPR002885 Pentatricopeptide_repeat 243 272
IPR002885 Pentatricopeptide_repeat 303 350
IPR002885 Pentatricopeptide_repeat 598 645
IPR002885 Pentatricopeptide_repeat 699 747
IPR002885 Pentatricopeptide_repeat 434 482
IPR002885 Pentatricopeptide_repeat 140 186
IPR002885 Pentatricopeptide_repeat 536 567
No external refs found!