Gb_27855

Description : HOX-like transcription factor

Gene families : OG0001780 (Archaeplastida) Phylogenetic Tree(s): OG0001780_tree ,
OG_05_0010118 (LandPlants) Phylogenetic Tree(s): OG_05_0010118_tree ,
OG_06_0008665 (SeedPlants) Phylogenetic Tree(s): OG_06_0008665_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_27855
Cluster	HCCA: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G28420	HB-1	homeobox-1	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018501	DDT_dom	492	547
IPR028941	WHIM2_dom	949	1020
IPR001356	Homeobox_dom	15	69
IPR028942	WHIM1_dom	820	861

External Links

No external refs found!