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  5. Gb_27869

Gb_27869


Description : transcription factor (bHLH)


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27869
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00265010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.03 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.03 Archaeplastida
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.03 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.06 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.03 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01009467001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01009479001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01022120001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01026516001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_306658g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
Smo405220 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc03g121240.1.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc04g078790.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g088790.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e002331_P003 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.09 Archaeplastida
Zm00001e027758_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e040380_P002 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 269 308
No external refs found!