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  5. Gb_28116

Gb_28116


Description : component beta-Tubulin of alpha-beta-Tubulin heterodimer


Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree ,
OG_05_0000074 (LandPlants) Phylogenetic Tree(s): OG_05_0000074_tree ,
OG_06_0000065 (SeedPlants) Phylogenetic Tree(s): OG_06_0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28116
Cluster HCCA: Cluster_303

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00255970 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
AMTR_s00010p00119100 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
AMTR_s00101p00135960 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
AT1G20010 TUB5 tubulin beta-5 chain 0.05 Archaeplastida
AT1G75780 TUB1 tubulin beta-1 chain 0.04 Archaeplastida
AT5G12250 TUB6 beta-6 tubulin 0.03 Archaeplastida
AT5G23860 TUB8 tubulin beta 8 0.04 Archaeplastida
AT5G44340 TUB4 tubulin beta chain 4 0.02 Archaeplastida
AT5G62690 TUB2 tubulin beta chain 2 0.03 Archaeplastida
AT5G62700 TUB3 tubulin beta chain 3 0.03 Archaeplastida
GSVIVT01019758001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.02 Archaeplastida
GSVIVT01021707001 No alias Tubulin beta chain (Fragment) OS=Glycine max 0.03 Archaeplastida
LOC_Os01g59150.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
LOC_Os02g07060.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
MA_10431251g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
MA_18465g0010 No alias Tubulin beta-5 chain OS=Gossypium hirsutum... 0.02 Archaeplastida
MA_219029g0010 No alias Tubulin beta-1 chain OS=Lupinus albus... 0.02 Archaeplastida
MA_230579g0010 No alias Tubulin beta-8 chain OS=Zea mays (sp|q41785|tbb8_maize : 281.0) 0.04 Archaeplastida
MA_55439g0010 No alias Tubulin beta-1 chain OS=Solanum tuberosum... 0.02 Archaeplastida
MA_623245g0010 No alias No annotation 0.02 Archaeplastida
MA_79708g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
MA_8976798g0010 No alias Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 97.8) 0.02 Archaeplastida
MA_947959g0010 No alias No annotation 0.03 Archaeplastida
Pp3c2_26580V3.1 No alias tubulin beta chain 2 0.02 Archaeplastida
Pp3c6_7400V3.1 No alias tubulin beta 8 0.03 Archaeplastida
Pp3c6_7500V3.1 No alias tubulin beta 8 0.03 Archaeplastida
Smo170592 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Smo183654 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Solyc03g025730.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Solyc06g035970.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Solyc06g076640.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Solyc10g080940.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Zm00001e019525_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!