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Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 472.0)
Gene families : OG0008685 (Archaeplastida) Phylogenetic Tree(s): OG0008685_tree ,
OG_05_0064540 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0058102 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_28171 | |
| Cluster | HCCA: Cluster_231 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_28759 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | Archaeplastida | |
| MA_15913g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.11 | Archaeplastida | |
| MA_44936g0010 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.08 | Archaeplastida | |
| MA_5858185g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | Archaeplastida | |
| MA_946216g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 117 | 165 |
| IPR002885 | Pentatricopeptide_repeat | 309 | 356 |
| IPR002885 | Pentatricopeptide_repeat | 410 | 458 |
| IPR002885 | Pentatricopeptide_repeat | 190 | 216 |
| IPR002885 | Pentatricopeptide_repeat | 484 | 508 |
| IPR002885 | Pentatricopeptide_repeat | 249 | 279 |
| IPR002885 | Pentatricopeptide_repeat | 218 | 248 |
| No external refs found! |