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  5. Gb_28207

Gb_28207


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 579.0)


Gene families : OG0031258 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0063374 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0056842 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28207
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Solyc06g005690.3.1 No alias Pentatricopeptide repeat-containing protein At5g59600... 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 373 398
IPR032867 DYW_dom 572 696
IPR002885 Pentatricopeptide_repeat 297 344
IPR002885 Pentatricopeptide_repeat 399 446
IPR002885 Pentatricopeptide_repeat 228 275
IPR002885 Pentatricopeptide_repeat 127 173
No external refs found!