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  5. Gb_28214

Gb_28214


Description : SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana (sp|f4jcu0|sua_arath : 471.0)


Gene families : OG0004416 (Archaeplastida) Phylogenetic Tree(s): OG0004416_tree ,
OG_05_0004027 (LandPlants) Phylogenetic Tree(s): OG_05_0004027_tree ,
OG_06_0006584 (SeedPlants) Phylogenetic Tree(s): OG_06_0006584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28214
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT3G54230 SUA suppressor of abi3-5 0.02 Archaeplastida
GSVIVT01013204001 No alias SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.02 Archaeplastida
MA_188532g0010 No alias SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g04870.1 No alias SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c10_21700V3.1 No alias suppressor of abi3-5 0.05 Archaeplastida
Solyc08g077310.3.1 No alias SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e033409_P006 No alias SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031023 microtubule organizing center organization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 286 343
IPR000467 G_patch_dom 1044 1085
No external refs found!