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  5. Gb_28437

Gb_28437


Description : RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana (sp|q9lqv2|rdr1_arath : 551.0)


Gene families : OG0000823 (Archaeplastida) Phylogenetic Tree(s): OG0000823_tree ,
OG_05_0002293 (LandPlants) Phylogenetic Tree(s): OG_05_0002293_tree ,
OG_06_0004327 (SeedPlants) Phylogenetic Tree(s): OG_06_0004327_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28437
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Gb_17278 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10436273g0010 No alias RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 297 609
IPR007855 RNA-dep_RNA_pol_euk-typ 201 294
No external refs found!