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  5. Gb_28457

Gb_28457


Description : Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana (sp|q0wpz6|pp158_arath : 594.0)


Gene families : OG0009700 (Archaeplastida) Phylogenetic Tree(s): OG0009700_tree ,
OG_05_0009739 (LandPlants) Phylogenetic Tree(s): OG_05_0009739_tree ,
OG_06_0007391 (SeedPlants) Phylogenetic Tree(s): OG_06_0007391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28457
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023885001 No alias Pentatricopeptide repeat-containing protein At2g17140... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 558 606
IPR002885 Pentatricopeptide_repeat 288 337
IPR002885 Pentatricopeptide_repeat 358 407
IPR002885 Pentatricopeptide_repeat 148 193
IPR002885 Pentatricopeptide_repeat 428 477
IPR002885 Pentatricopeptide_repeat 624 657
IPR002885 Pentatricopeptide_repeat 521 551
IPR002885 Pentatricopeptide_repeat 210 243
IPR002885 Pentatricopeptide_repeat 661 690
IPR002885 Pentatricopeptide_repeat 246 278
IPR002885 Pentatricopeptide_repeat 735 765
No external refs found!