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  5. Gb_28554

Gb_28554


Description : RING-H2-class E3 ligase


Gene families : OG0001427 (Archaeplastida) Phylogenetic Tree(s): OG0001427_tree ,
OG_05_0002520 (LandPlants) Phylogenetic Tree(s): OG_05_0002520_tree ,
OG_06_0002608 (SeedPlants) Phylogenetic Tree(s): OG_06_0002608_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28554
Cluster HCCA: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
AT5G55970 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc08g067770.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g006940.2.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 372 413
No external refs found!