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  5. Gb_28586

Gb_28586


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 529.0)


Gene families : OG0030424 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0028229 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0026516 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28586
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
MA_4511g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 707 731
IPR002885 Pentatricopeptide_repeat 343 369
IPR002885 Pentatricopeptide_repeat 633 681
IPR002885 Pentatricopeptide_repeat 167 214
IPR002885 Pentatricopeptide_repeat 531 580
IPR002885 Pentatricopeptide_repeat 400 447
IPR002885 Pentatricopeptide_repeat 268 316
IPR002885 Pentatricopeptide_repeat 499 528
No external refs found!