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  5. Gb_28795

Gb_28795


Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 571.0)


Gene families : OG0009457 (Archaeplastida) Phylogenetic Tree(s): OG0009457_tree ,
OG_05_0058608 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0051690 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28795
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
MA_103762g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
MA_111075g0010 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.07 Archaeplastida
MA_392867g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
MA_6126791g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 618 731
IPR002885 Pentatricopeptide_repeat 140 187
IPR002885 Pentatricopeptide_repeat 49 85
IPR002885 Pentatricopeptide_repeat 444 491
IPR002885 Pentatricopeptide_repeat 342 389
IPR002885 Pentatricopeptide_repeat 242 287
IPR002885 Pentatricopeptide_repeat 418 440
IPR002885 Pentatricopeptide_repeat 519 542
No external refs found!