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  5. Gb_28819

Gb_28819


Description : BEACH domain-containing protein B OS=Arabidopsis thaliana (sp|f4i9t0|bchb_arath : 2472.0)


Gene families : OG0003842 (Archaeplastida) Phylogenetic Tree(s): OG0003842_tree ,
OG_05_0003852 (LandPlants) Phylogenetic Tree(s): OG_05_0003852_tree ,
OG_06_0003548 (SeedPlants) Phylogenetic Tree(s): OG_06_0003548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28819
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00224700 evm_27.TU.AmTr_v1... BEACH domain-containing protein B OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G58230 No alias binding 0.12 Archaeplastida
GSVIVT01009194001 No alias BEACH domain-containing protein B OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os02g06720.1 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os02g06725.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g46480.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434688g0010 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.04 Archaeplastida
MA_955112g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp1g22060.1 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.07 Archaeplastida
Pp3c20_23460V3.1 No alias binding 0.05 Archaeplastida
Smo107849 No alias BEACH domain-containing protein B OS=Arabidopsis thaliana 0.07 Archaeplastida
Solyc04g076500.4.1 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.06 Archaeplastida
Solyc04g076510.3.1 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e025170_P001 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.12 Archaeplastida
Zm00001e030316_P001 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR000409 BEACH_dom 2568 2843
IPR031570 DUF4704 1258 1540
IPR001680 WD40_repeat 2980 3014
IPR001680 WD40_repeat 3046 3079
IPR023362 PH-BEACH_dom 2376 2528
No external refs found!