Gb_28918

Description : subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_28918
Cluster	HCCA: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00122p00117310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00148p00082240	evm_27.TU.AmTr_v1...	ABC transporter G family member 39 OS=Oryza sativa...	0.01	Archaeplastida
AT1G66950	PDR11, ATPDR11	pleiotropic drug resistance 11	0.03	Archaeplastida
AT4G15233	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
AT4G15236	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.04	Archaeplastida
Cpa\|evm.model.tig00020892.22	No alias	ABC transporter G family member 51 OS=Oryza sativa...	0.01	Archaeplastida
GSVIVT01017198001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01024743001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01031314001	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
GSVIVT01034746001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Gb_15493	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os02g11760.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os02g21340.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os02g32690.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
LOC_Os09g16330.2	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_10429038g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_12965g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_135152g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_17319g0020	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_249533g0010	No alias	ABC transporter G family member 31 OS=Arabidopsis...	0.02	Archaeplastida
MA_949447g0010	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Mp8g13070.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Pp3c12_17520V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Pp3c16_13830V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.04	Archaeplastida
Pp3c16_9600V3.1	No alias	pleiotropic drug resistance 11	0.02	Archaeplastida
Pp3c18_21520V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Pp3c19_18700V3.1	No alias	pleiotropic drug resistance 7	0.03	Archaeplastida
Pp3c5_23360V3.1	No alias	pleiotropic drug resistance 7	0.03	Archaeplastida
Pp3c5_3240V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
Smo115821	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo412699	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo417272	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo96758	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc02g081870.4.1	No alias	abscisic acid transporter (ABCG31). subfamily ABCG transporter	0.02	Archaeplastida
Solyc05g018510.3.1	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.04	Archaeplastida
Solyc08g067610.3.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Solyc08g067620.2.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Solyc09g091670.3.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Solyc11g007290.1.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc11g067000.3.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Solyc12g019620.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc12g019640.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e016714_P002	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.05	Archaeplastida
Zm00001e019932_P002	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e027849_P001	No alias	subfamily ABCG transporter	0.01	Archaeplastida
Zm00001e033689_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e033690_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e035120_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005244	voltage-gated ion channel activity	IEP	Neighborhood
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Neighborhood
MF	GO:0005253	anion channel activity	IEP	Neighborhood
MF	GO:0005254	chloride channel activity	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006821	chloride transport	IEP	Neighborhood
MF	GO:0008308	voltage-gated anion channel activity	IEP	Neighborhood
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022832	voltage-gated channel activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0046658	anchored component of plasma membrane	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
MF	GO:0071949	FAD binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	1219	1432
IPR013525	ABC_2_trans	553	764
IPR013581	PDR_assoc	773	828
IPR003439	ABC_transporter-like	207	397
IPR003439	ABC_transporter-like	921	1073
IPR029481	ABC_trans_N	131	182

External Links

No external refs found!

Gb_28918

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation