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AT2G41980


Description : Protein with RING/U-box and TRAF-like domains


Gene families : OG0000967 (Archaeplastida) Phylogenetic Tree(s): OG0000967_tree ,
OG_05_0000653 (LandPlants) Phylogenetic Tree(s): OG_05_0000653_tree ,
OG_06_0000482 (SeedPlants) Phylogenetic Tree(s): OG_06_0000482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G41980

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00125110 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
AT5G53360 No alias TRAF-like superfamily protein 0.05 Archaeplastida
Zm00001e024744_P002 No alias SINA-class E3 ligase 0.02 Archaeplastida
Zm00001e035769_P001 No alias SINA-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISS Interproscan
BP GO:0007275 multicellular organism development ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005774 vacuolar membrane IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 99 298
No external refs found!