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  5. Gb_28978

Gb_28978


Description : Phototropin-1A OS=Oryza sativa subsp. japonica (sp|q2qyy8|pht1a_orysj : 95.9)


Gene families : OG0000079 (Archaeplastida) Phylogenetic Tree(s): OG0000079_tree ,
OG_05_0002077 (LandPlants) Phylogenetic Tree(s): OG_05_0002077_tree ,
OG_06_0002753 (SeedPlants) Phylogenetic Tree(s): OG_06_0002753_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28978
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AT1G53700 WAG1, PK3AT WAG 1 0.03 Archaeplastida
AT3G14370 WAG2 Protein kinase superfamily protein 0.04 Archaeplastida
LOC_Os03g14840.1 No alias protein kinase (AGC-VIII) 0.04 Archaeplastida
LOC_Os09g31210.1 No alias protein kinase (AGC-VIII) 0.04 Archaeplastida
LOC_Os12g42020.1 No alias PINOID auxin transport regulator kinase. protein kinase... 0.03 Archaeplastida
Mp8g05020.1 No alias Phototropin-1A OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Smo89681 No alias Protein modification.phosphorylation.AGC kinase... 0.04 Archaeplastida
Zm00001e010058_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000014 PAS 57 111
No external refs found!