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  5. AT2G42430

AT2G42430 (LBD16, ASL18)


Aliases : LBD16, ASL18

Description : lateral organ boundaries-domain 16


Gene families : OG0000938 (Archaeplastida) Phylogenetic Tree(s): OG0000938_tree ,
OG_05_0000559 (LandPlants) Phylogenetic Tree(s): OG_05_0000559_tree ,
OG_06_0000336 (SeedPlants) Phylogenetic Tree(s): OG_06_0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G42430
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT2G42440 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Archaeplastida
AT3G03760 LBD20 LOB domain-containing protein 20 0.02 Archaeplastida
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.01 Archaeplastida
GSVIVT01028294001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
LOC_Os02g57490.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os03g14270.1 No alias transcription factor (AS2/LOB) 0.12 Archaeplastida
MA_8060019g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp8g11560.1 No alias transcription factor (AS2/LOB) 0.08 Archaeplastida
Solyc01g091420.2.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc01g098220.2.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc09g066260.4.1 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
Solyc09g066270.3.1 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
Zm00001e000391_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e001031_P001 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
Zm00001e019686_P001 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
Zm00001e042347_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e042443_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e042448_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010311 lateral root formation IMP Interproscan
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006098 pentose-phosphate shunt IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008429 phosphatidylethanolamine binding IEP Neighborhood
CC GO:0009534 chloroplast thylakoid IEP Neighborhood
BP GO:0010029 regulation of seed germination IEP Neighborhood
BP GO:0010030 positive regulation of seed germination IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010090 trichome morphogenesis IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
CC GO:0031976 plastid thylakoid IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051156 glucose 6-phosphate metabolic process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1900140 regulation of seedling development IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 15 112
No external refs found!