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  5. AT2G42460

AT2G42460


Description : TRAF-like family protein


Gene families : OG0002414 (Archaeplastida) Phylogenetic Tree(s): OG0002414_tree ,
OG_05_0001602 (LandPlants) Phylogenetic Tree(s): OG_05_0001602_tree ,
OG_06_0000866 (SeedPlants) Phylogenetic Tree(s): OG_06_0000866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G42460
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.05 Archaeplastida
AT1G31380 No alias TRAF-like family protein 0.08 Archaeplastida
AT1G31400 No alias TRAF-like family protein 0.04 Archaeplastida
AT2G01790 No alias TRAF-like family protein 0.03 Archaeplastida
AT2G05410 No alias TRAF-like family protein 0.08 Archaeplastida
AT2G42455 No alias No description available 0.07 Archaeplastida
AT2G42465 No alias No description available 0.07 Archaeplastida
AT2G42470 No alias TRAF-like family protein 0.08 Archaeplastida
AT2G42475 No alias No description available 0.09 Archaeplastida
AT2G42480 No alias TRAF-like family protein 0.08 Archaeplastida
AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.06 Archaeplastida
AT3G58210 No alias TRAF-like family protein 0.02 Archaeplastida
AT3G58230 No alias Ubiquitin-specific protease family C19-related protein 0.03 Archaeplastida
AT3G58240 No alias TRAF-like superfamily protein 0.07 Archaeplastida
AT3G58260 No alias TRAF-like family protein 0.08 Archaeplastida
AT3G58290 No alias TRAF-like superfamily protein 0.08 Archaeplastida
AT3G58300 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.04 Archaeplastida
AT3G58340 No alias TRAF-like family protein 0.09 Archaeplastida
AT3G58360 No alias TRAF-like family protein 0.09 Archaeplastida
AT3G58370 No alias TRAF-like family protein 0.08 Archaeplastida
AT3G58400 No alias TRAF-like family protein 0.02 Archaeplastida
AT3G58440 No alias TRAF-like superfamily protein 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
CC GO:0000315 organellar large ribosomal subunit IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 14 132
No external refs found!