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Gb_29513


Description : APO protein 1, chloroplastic OS=Arabidopsis thaliana (sp|q9xir4|apo1_arath : 410.0)


Gene families : OG0000992 (Archaeplastida) Phylogenetic Tree(s): OG0000992_tree ,
OG_05_0001157 (LandPlants) Phylogenetic Tree(s): OG_05_0001157_tree ,
OG_06_0003046 (SeedPlants) Phylogenetic Tree(s): OG_06_0003046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29513
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018392001 No alias APO protein 1, chloroplastic OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os02g50010.1 No alias APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_136047g0010 No alias APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_931234g0010 No alias APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc08g080250.4.1 No alias APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc09g009400.4.1 No alias APO protein 3, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e023481_P001 No alias APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR023342 APO_dom 313 432
IPR023342 APO_dom 78 279
No external refs found!