Gb_29571


Description : 30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana (sp|q9xj27|rr9_arath : 153.0)


Gene families : OG0001974 (Archaeplastida) Phylogenetic Tree(s): OG0001974_tree ,
OG_05_0007849 (LandPlants) Phylogenetic Tree(s): OG_05_0007849_tree ,
OG_06_0009917 (SeedPlants) Phylogenetic Tree(s): OG_06_0009917_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29571
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT1G74970 TWN3, RPS9 ribosomal protein S9 0.07 Archaeplastida
Cre02.g106750 No alias No description available 0.02 Archaeplastida
GSVIVT01009628001 No alias Protein biosynthesis.organelle translation... 0.08 Archaeplastida
LOC_Os03g55930.1 No alias component psRPS9 of small ribosomal subunit proteome 0.06 Archaeplastida
MA_141286g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_18349g0020 No alias 30S ribosomal protein S9, chloroplastic OS=Spinacia... 0.05 Archaeplastida
Mp3g01740.1 No alias component psRPS9 of small ribosomal subunit proteome 0.11 Archaeplastida
Pp3c12_1790V3.1 No alias ribosomal protein S9 0.08 Archaeplastida
Pp3c9_4940V3.1 No alias ribosomal protein S9 0.04 Archaeplastida
Smo17067 No alias 30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea 0.04 Archaeplastida
Solyc04g079790.3.1 No alias component psRPS9 of small ribosomal subunit proteome 0.05 Archaeplastida
Zm00001e005809_P002 No alias component psRPS9 of small ribosomal subunit proteome 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Neighborhood
MF GO:0004618 phosphoglycerate kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0034311 diol metabolic process IEP Neighborhood
BP GO:0034312 diol biosynthetic process IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 51 150
No external refs found!