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  5. Gb_29958

Gb_29958


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0000309 (SeedPlants) Phylogenetic Tree(s): OG_06_0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29958
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00051p00020930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00405p00009920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.03 Archaeplastida
AT3G03660 WOX11 WUSCHEL related homeobox 11 0.03 Archaeplastida
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.04 Archaeplastida
AT3G18010 WOX1 WUSCHEL related homeobox 1 0.03 Archaeplastida
AT5G17810 WOX12 WUSCHEL related homeobox 12 0.03 Archaeplastida
GSVIVT01009453001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01016360001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01018787001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
LOC_Os01g62310.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os05g02730.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os05g48990.1 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os07g48560.1 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_10234279g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_10344604g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_121643g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_42637g0010 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_747816g0010 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc03g118770.4.1 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc04g078650.4.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Solyc06g072890.3.1 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc06g075567.1.1 No alias transcription factor (WOX) 0.04 Archaeplastida
Solyc11g072790.2.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e001527_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e019245_P001 No alias transcription factor (WOX) 0.01 Archaeplastida
Zm00001e028720_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e032433_P003 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e038272_P001 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e040096_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e041785_P001 No alias transcription factor (WOX) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 33 92
No external refs found!