1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_29960

Gb_29960


Description : Protein HOTHEAD OS=Arabidopsis thaliana (sp|q9s746|hth_arath : 401.0)


Gene families : OG0000176 (Archaeplastida) Phylogenetic Tree(s): OG0000176_tree ,
OG_05_0002181 (LandPlants) Phylogenetic Tree(s): OG_05_0002181_tree ,
OG_06_0001354 (SeedPlants) Phylogenetic Tree(s): OG_06_0001354_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29960
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263600 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00028p00206910 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00028p00208270 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00069p00163110 evm_27.TU.AmTr_v1... Protein HOTHEAD OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G12570 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Archaeplastida
AT1G73050 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Archaeplastida
AT3G56060 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.08 Archaeplastida
AT5G51950 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 Archaeplastida
GSVIVT01010648001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01010650001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01019871001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_00808 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_00812 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_12981 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_16610 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.07 Archaeplastida
Gb_27931 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_28422 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_31766 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_33524 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.07 Archaeplastida
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.07 Archaeplastida
Gb_38455 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_39926 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_39928 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os02g45530.1 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g02700.1 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g48400.1 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os08g31030.1 No alias omega-hydroxy fatty acyl dehydrogenase 0.03 Archaeplastida
MA_10041123g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_101600g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432967g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.11 Archaeplastida
MA_10434331g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_115358g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_11792g0020 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.11 Archaeplastida
Smo108291 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.05 Archaeplastida
Smo153538 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.08 Archaeplastida
Smo404769 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo405960 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo407760 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo410832 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo427468 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.08 Archaeplastida
Smo80819 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo90809 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc03g121600.4.1 No alias omega-hydroxy fatty acyl dehydrogenase 0.06 Archaeplastida
Solyc06g035580.3.1 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc08g080190.4.1 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e002156_P001 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e004200_P002 No alias omega-hydroxy fatty acyl dehydrogenase 0.06 Archaeplastida
Zm00001e007199_P001 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e015434_P001 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030422_P001 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 402 543
IPR000172 GMC_OxRdtase_N 51 336
No external refs found!