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  5. Gb_30098

Gb_30098


Description : Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana (sp|o81767|pp348_arath : 633.0)


Gene families : OG0009682 (Archaeplastida) Phylogenetic Tree(s): OG0009682_tree ,
OG_05_0056820 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0049764 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30098
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Gb_04028 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.05 Archaeplastida
Gb_14728 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida
MA_20206g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 311 337
IPR002885 Pentatricopeptide_repeat 505 527
IPR002885 Pentatricopeptide_repeat 605 630
IPR002885 Pentatricopeptide_repeat 109 134
IPR002885 Pentatricopeptide_repeat 339 364
IPR002885 Pentatricopeptide_repeat 370 395
IPR002885 Pentatricopeptide_repeat 531 579
IPR002885 Pentatricopeptide_repeat 236 284
IPR002885 Pentatricopeptide_repeat 429 477
IPR002885 Pentatricopeptide_repeat 137 182
IPR002885 Pentatricopeptide_repeat 397 425
IPR032867 DYW_dom 704 828
No external refs found!