Gb_30261


Description : no hits & (original description: none)


Gene families : OG0000364 (Archaeplastida) Phylogenetic Tree(s): OG0000364_tree ,
OG_05_0000134 (LandPlants) Phylogenetic Tree(s): OG_05_0000134_tree ,
OG_06_0000108 (SeedPlants) Phylogenetic Tree(s): OG_06_0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30261
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Gb_00288 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_00434 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_03442 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_08105 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 Archaeplastida
Gb_08402 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_15074 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_16799 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_18335 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Gb_21518 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Archaeplastida
Gb_25323 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_26666 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 Archaeplastida
Gb_26718 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Archaeplastida
Gb_27233 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_27666 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_27945 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_28242 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 Archaeplastida
Gb_28622 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_29350 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_29919 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_30314 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_30317 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Archaeplastida
Gb_33414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_33583 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_34085 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_36579 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_38122 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_38136 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_40384 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_40566 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Archaeplastida
Gb_41335 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 Archaeplastida
Gb_41697 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!