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Description : component LSm3 of U6-associated LSm accessory ribonucleoprotein complex
Gene families : OG0007001 (Archaeplastida) Phylogenetic Tree(s): OG0007001_tree ,
OG_05_0007735 (LandPlants) Phylogenetic Tree(s): OG_05_0007735_tree ,
OG_06_0008806 (SeedPlants) Phylogenetic Tree(s): OG_06_0008806_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_30400 | |
| Cluster | HCCA: Cluster_150 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00030p00090360 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.03 | Archaeplastida | |
| AT1G76860 | No alias | Small nuclear ribonucleoprotein family protein | 0.02 | Archaeplastida | |
| Cre16.g662300 | No alias | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.01 | Archaeplastida | |
| GSVIVT01034520001 | No alias | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Neighborhood |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Neighborhood |
| BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| CC | GO:0019866 | organelle inner membrane | IEP | Neighborhood |
| BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
| BP | GO:0022904 | respiratory electron transport chain | IEP | Neighborhood |
| CC | GO:0031090 | organelle membrane | IEP | Neighborhood |
| CC | GO:0031966 | mitochondrial membrane | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0043248 | proteasome assembly | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044455 | mitochondrial membrane part | IEP | Neighborhood |
| CC | GO:0045275 | respiratory chain complex III | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| CC | GO:0070069 | cytochrome complex | IEP | Neighborhood |
| CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Neighborhood |
| CC | GO:0098803 | respiratory chain complex | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 14 | 60 |
| No external refs found! |