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  5. Gb_30475

Gb_30475


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 125.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000372 (LandPlants) Phylogenetic Tree(s): OG_05_0000372_tree ,
OG_06_0000167 (SeedPlants) Phylogenetic Tree(s): OG_06_0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30475
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.17 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.15 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.51 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Cre01.g006402 No alias No description available 0.02 Archaeplastida
Gb_00235 No alias Uncharacterized mitochondrial protein AtMg00860... 0.12 Archaeplastida
Gb_01278 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_01640 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_02281 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_02835 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_03960 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_03978 No alias no hits & (original description: none) 0.15 Archaeplastida
Gb_04018 No alias Uncharacterized mitochondrial protein AtMg00860... 0.13 Archaeplastida
Gb_04560 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_06149 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.09 Archaeplastida
Gb_07009 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_08366 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_09554 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_09706 No alias no hits & (original description: none) 0.18 Archaeplastida
Gb_10189 No alias Uncharacterized mitochondrial protein AtMg00860... 0.21 Archaeplastida
Gb_10780 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_12173 No alias Uncharacterized mitochondrial protein AtMg00860... 0.08 Archaeplastida
Gb_12464 No alias no hits & (original description: none) 0.11 Archaeplastida
Gb_12881 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_12930 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_13328 No alias no hits & (original description: none) 0.19 Archaeplastida
Gb_14060 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_14370 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.11 Archaeplastida
Gb_14507 No alias no hits & (original description: none) 0.11 Archaeplastida
Gb_14590 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_14609 No alias Uncharacterized mitochondrial protein AtMg00860... 0.1 Archaeplastida
Gb_15436 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_15572 No alias Uncharacterized mitochondrial protein AtMg00860... 0.07 Archaeplastida
Gb_17315 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_18576 No alias no hits & (original description: none) 0.09 Archaeplastida
Gb_18694 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_18710 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.09 Archaeplastida
Gb_18721 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_20044 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.08 Archaeplastida
Gb_21092 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_21108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.16 Archaeplastida
Gb_21346 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.17 Archaeplastida
Gb_21510 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_21943 No alias Uncharacterized mitochondrial protein AtMg00860... 0.13 Archaeplastida
Gb_22113 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_23550 No alias no hits & (original description: none) 0.13 Archaeplastida
Gb_23692 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_23709 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.11 Archaeplastida
Gb_24142 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_25344 No alias Uncharacterized mitochondrial protein AtMg00860... 0.11 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.15 Archaeplastida
Gb_32815 No alias no hits & (original description: none) 0.12 Archaeplastida
Gb_32988 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_33301 No alias Uncharacterized mitochondrial protein AtMg00860... 0.07 Archaeplastida
Gb_34528 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_35176 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_35936 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_36303 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.22 Archaeplastida
Gb_36546 No alias Uncharacterized mitochondrial protein AtMg00860... 0.09 Archaeplastida
Gb_36965 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_38300 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_38589 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_38708 No alias Uncharacterized mitochondrial protein AtMg00860... 0.2 Archaeplastida
Gb_39593 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_40215 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.22 Archaeplastida
Pp3c3_35120V3.1 No alias No annotation 0.02 Archaeplastida
Solyc08g041685.1.1 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 444 541
IPR000477 RT_dom 918 1028
No external refs found!