Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 178.0)
Gene families : OG0000054 (Archaeplastida) Phylogenetic Tree(s): OG0000054_tree ,
OG_05_0000126 (LandPlants) Phylogenetic Tree(s): OG_05_0000126_tree ,
OG_06_0000108 (SeedPlants) Phylogenetic Tree(s): OG_06_0000108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_30542 | |
Cluster | HCCA: Cluster_44 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre03.g183950 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
Gb_05895 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.07 | Archaeplastida | |
Gb_08000 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.09 | Archaeplastida | |
Gb_10172 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.13 | Archaeplastida | |
Gb_10191 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.12 | Archaeplastida | |
Gb_14369 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
Gb_16624 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
Gb_18989 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.12 | Archaeplastida | |
Gb_22530 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.09 | Archaeplastida | |
Gb_23035 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | Archaeplastida | |
Gb_23452 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | Archaeplastida | |
Gb_25800 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | Archaeplastida | |
Gb_29932 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
Gb_30477 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
Gb_30851 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
Gb_31472 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
Gb_34088 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
Gb_38369 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.1 | Archaeplastida | |
Pp3c15_880V3.1 | No alias | DNA/RNA polymerases superfamily protein | 0.02 | Archaeplastida | |
Pp3c17_23320V3.1 | No alias | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 0.02 | Archaeplastida | |
Solyc06g150112.1.1 | No alias | No annotation | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015074 | DNA integration | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001584 | Integrase_cat-core | 2 | 57 |
No external refs found! |