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  5. Gb_30549

Gb_30549


Description : Flavanone 3-dioxygenase 2 OS=Oryza sativa subsp. japonica (sp|q8w2x5|fl3h2_orysj : 87.4)


Gene families : OG0000576 (Archaeplastida) Phylogenetic Tree(s): OG0000576_tree ,
OG_05_0000301 (LandPlants) Phylogenetic Tree(s): OG_05_0000301_tree ,
OG_06_0000134 (SeedPlants) Phylogenetic Tree(s): OG_06_0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30549
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Zm00001e032503_P001 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 142 211
IPR026992 DIOX_N 10 76
No external refs found!