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  5. AT2G43580

AT2G43580


Description : Chitinase family protein


Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000272 (LandPlants) Phylogenetic Tree(s): OG_05_0000272_tree ,
OG_06_0000276 (SeedPlants) Phylogenetic Tree(s): OG_06_0000276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G43580
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00244170 evm_27.TU.AmTr_v1... Chitinase 3 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AT2G43590 No alias Chitinase family protein 0.06 Archaeplastida
AT3G47540 No alias Chitinase family protein 0.03 Archaeplastida
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.04 Archaeplastida
GSVIVT01028243001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01038126001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_02223 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_03375 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_20316 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.1 Archaeplastida
Gb_20766 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os01g18400.1 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os02g39330.1 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os06g51050.1 No alias Chitinase 3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os06g51060.1 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g41100.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
MA_102538g0010 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 100.0) 0.03 Archaeplastida
MA_10427514g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10430424g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10431378g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_10431378g0020 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_10435326g0010 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_18470g0010 No alias Basic endochitinase C OS=Secale cereale... 0.09 Archaeplastida
MA_18470g0020 No alias Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.05 Archaeplastida
MA_36141g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
MA_3814373g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_381956g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_4984466g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5970350g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_80085g0010 No alias Basic endochitinase C OS=Secale cereale... 0.03 Archaeplastida
MA_8921185g0010 No alias Basic endochitinase C OS=Secale cereale... 0.03 Archaeplastida
MA_8960362g0010 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 81.6) 0.11 Archaeplastida
MA_9682123g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Mp2g24440.1 No alias Endochitinase CH25 OS=Brassica napus... 0.03 Archaeplastida
Mp4g20450.1 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 229.0) 0.03 Archaeplastida
Mp4g20470.1 No alias Basic endochitinase B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c16_17090V3.1 No alias homolog of carrot EP3-3 chitinase 0.06 Archaeplastida
Solyc06g053380.3.1 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e007715_P001 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 330.0) 0.06 Archaeplastida
Zm00001e007716_P001 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 455.0) 0.03 Archaeplastida
Zm00001e030152_P001 No alias Basic endochitinase A OS=Secale cereale... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0009873 ethylene-activated signaling pathway RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009723 response to ethylene IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009814 defense response, incompatible interaction IEP Neighborhood
BP GO:0009817 defense response to fungus, incompatible interaction IEP Neighborhood
BP GO:0009861 jasmonic acid and ethylene-dependent systemic resistance IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010043 response to zinc ion IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
MF GO:0043295 glutathione binding IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
MF GO:0047634 agmatine N4-coumaroyltransferase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
BP GO:0080027 response to herbivore IEP Neighborhood
MF GO:0097243 flavonoid binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
MF GO:1900750 oligopeptide binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
MF GO:2001147 camalexin binding IEP Neighborhood
MF GO:2001227 quercitrin binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 25 57
IPR000726 Glyco_hydro_19_cat 220 265
IPR000726 Glyco_hydro_19_cat 72 212
No external refs found!