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  5. Gb_30835

Gb_30835


Description : Ribonuclease 1 OS=Arabidopsis thaliana (sp|p42813|rns1_arath : 166.0)


Gene families : OG0000815 (Archaeplastida) Phylogenetic Tree(s): OG0000815_tree ,
OG_05_0010159 (LandPlants) Phylogenetic Tree(s): OG_05_0010159_tree ,
OG_06_0006777 (SeedPlants) Phylogenetic Tree(s): OG_06_0006777_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30835
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AT1G14210 No alias Ribonuclease T2 family protein 0.02 Archaeplastida
AT1G26820 RNS3 ribonuclease 3 0.03 Archaeplastida
GSVIVT01019974001 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.02 Archaeplastida
Gb_38141 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g67190.1 No alias Ribonuclease 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g43670.1 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10433186g0010 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_4032367g0010 No alias Ribonuclease 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp2g08570.1 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 30 160
No external refs found!