Description : Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana (sp|q9si09|xeric_arath : 113.0)
Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_30879 | |
Cluster | HCCA: Cluster_244 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00200880 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
AMTR_s00021p00161170 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
AMTR_s00025p00229930 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
AMTR_s00040p00197990 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
AT2G18670 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
AT3G60966 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
AT4G11370 | RHA1A | RING-H2 finger A1A | 0.02 | Archaeplastida | |
Cpa|evm.model.tig00020876.18 | No alias | No description available | 0.01 | Archaeplastida | |
GSVIVT01009098001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
GSVIVT01020665001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
Gb_20666 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
LOC_Os02g36330.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
LOC_Os02g45780.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
LOC_Os03g57410.1 | No alias | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.03 | Archaeplastida | |
LOC_Os05g29710.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
LOC_Os06g09310.1 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
LOC_Os06g34530.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
LOC_Os06g34880.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
MA_101154g0010 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
MA_10429091g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
MA_2679g0010 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
MA_289646g0010 | No alias | E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... | 0.03 | Archaeplastida | |
MA_43543g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
MA_55185g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_92400g0010 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
Mp4g15970.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Solyc04g009780.1.1 | No alias | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.04 | Archaeplastida | |
Solyc06g051250.1.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
Solyc11g005280.1.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
Solyc11g007530.2.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
Zm00001e010029_P001 | No alias | ubiquitin protein ligase (XERICO) | 0.03 | Archaeplastida | |
Zm00001e010787_P001 | No alias | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
Zm00001e011306_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
Zm00001e030136_P001 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
Zm00001e030877_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
Zm00001e034025_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006825 | copper ion transport | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
BP | GO:0035434 | copper ion transmembrane transport | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0043631 | RNA polyadenylation | IEP | Neighborhood |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0070566 | adenylyltransferase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 104 | 147 |
No external refs found! |